PANGAIA

Pangenome Graph Algorithms and Data Integration

The PANGAIA project


PANGAIA is a EU funded project for filling the gap between the rapidly increasing power of DNA sequencing technologies and the current limitations in resolving the inherent complexity of the forthcoming volumes of data.
The leitmotif is to train young researchers in the area of computational pangenomics, while laying the computational foundations for personalized medicine.

Developing new techniques

Design and implementation of new techniques for constructing, managing, and analyzing pangenomes.

Share knowledge

Share knowledge and expertise with partner organizations. A key factor is the involvement of partners from non-EU countries such as Japan, Canada, and the US.
Furthermore, Open Science and FAIR (Findable, Accessible, Interoperable, and Reusable) principles are main staples of PANGAIA.

Strengthen collaborations

Strengthening the existing collaborations among EU and non-EU groups, while creating new collaborations among the participants both within the EU and beyond its borders.

Generate results

To improve the scientific excellence and international competitiveness of all participants, and to promote their capability to generate results and tools of wider impact on the market.

A pangenome of three SARS-CoV-2 strains
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FUNDING:

This project has received funding from the European Union’s Horizon 2020 Research and Innovation Staff Exchange programme under the Marie Skłodowska-Curie grant agreement No. 872539

participants


Illumina

Logo of the University of Milano-Bicocca
Logo of CWI
Logo of University of Bielefeld
Logo of Pasteur Institute

Our partners


  • Cornell University, United States
  • National University Corporation, The University of Tokyo, Japan
  • Simon Fraser University, Canada
  • The Pennsylvania State University, United States
  • The Regents of the University of California, United States

News & events


ALPACA ANNUAL WORKSHOP – PANGAIA ANNUAL WORKSHOP

31/08/2023

ALPACA ANNUAL WORKSHOP – PANGAIA ANNUAL WORKSHOP

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A multidisciplinary approach to epistasis detection

17/07/2023

A multidisciplinary approach to epistasis detection

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Computational Pangenomics – Shonan meeting no. 197

03/02/2023

Computational Pangenomics – Shonan meeting no. 197

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PANGAIA & ALPACA Seminars

10/01/2023

PANGAIA & ALPACA Seminars

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Introduction To Pangenomics School Interviews

11/11/2022

Introduction To Pangenomics School Interviews

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ALPACA / PANGAIA Winter Wet Lab School

20/09/2022

ALPACA / PANGAIA Winter Wet Lab School

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Pangenome sequencing and analysis

01/09/2022

Pangenome sequencing and analysis

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Introduction to Pan-genomics

27/05/2022

Introduction to Pan-genomics

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Video lecture for Slovak high school students

02/02/2022

Video lecture for Slovak high school students

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NERD 2022 (Non E’ Roba per Donne) – STEM FOR WOMEN

01/02/2022

NERD 2022 (Non E’ Roba per Donne) – STEM FOR WOMEN

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Contact us at info@pangenome.eu