Computational Pangenomics encompasses different research efforts for transitioning the existing paradigm from a sequence-based reference genome to a pan-genome, i.e., an evolutionarily coherent collection of genomes. Such a transition is urgently needed to effectively exploit the data masses produced by the technical advances and the widespread adoption of sequencing technologies. Graph-based representations of collections of […]
Details The seminar will be held over Microsoft Teams and to simplify matters, I would like to ask everyone interested in the seminar series to register here: https://forms.gle/C7S1Vcvw8gAVexiP6 Travis Gagie, Dalhousie University Computational pangenomics with the r-index (and friends) June 1, 2021, 4:00pm CEST Click here to join the meeting Abstract One of the basic principles […]
Details The seminar will be held over Microsoft Teams and to simplify matters, I would like to ask everyone interested in the seminar series to register here: https://forms.gle/C7S1Vcvw8gAVexiP6 Simone Zaccaria, UCL Cancer Institute Investigating the role of somatic copy-number alterations in shaping the landscape of cancer genomes Monday, April 19, 2021, 11:00-12:00 CEST Click here to […]
The laboratory of Bioinformatics and Experimental Algorithm (BIAS) at University of Milan-Bicocca organizes the 7th edition of the Data Structures in Bioinformatics (DSB) workshop. Life sciences in general, and particularly biology, are experiencing a revolution due technological innovations that allow easy, efficient, and comparatively unexpensive data acquisition. With these, life scientists can now obtain in […]
Details The seminar will be held over Microsoft Teams and to simplify matters, I would like to ask everyone interested in the seminar series to register here: https://forms.gle/C7S1Vcvw8gAVexiP6 Tizian Schulz, Bielefeld University Searching for Local Similarity in Pangenome Graphs December 7, 2020, 4:00pm CET Click here to join the meeting Abstract Increasing amounts of individual genomes […]
Details We are glad to announce the first ever meeting in PANGAIA seminar series. Paul Medvedev, Penn State University The theoretical analysis of sequencing bioinformatics algorithms November 16, 2020 – 16:00pm CET Click here to join the meeting Abstract The theoretical analysis of algorithm performance has been an important tool in the engineering of algorithms […]
Details Link to the Workshop https://eccb2020.info/ntbw05-computational-pangenomics-algorithms-applications/ Date: Friday, 4th September Time: 17:00 to 20:00 (CEST) Organisers Solon P. Pissis, Centrum Wiskunde & Informatica (CWI and VU), The Netherlands Yuri Pirola, Università degli Studi di Milano-Bicocca (UNIMIB), Italy Invited Speakers Valentina Boeva, ETH Zürich, Switzerland Tobias Marshall, Universität Düsseldorf, Germany Summary Computational Pangenomics encompasses different research […]
On January 28th and 29th, we had the kickoff meeting of Pangaia, in the Senate Room of the University of Milano – Bicocca, with participants from all beneficiaries. The most important decisions taken are reported below: